Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | CJ240_02460 | Not Available | Positive | 581975 - 583369 | 51333.3 |
| 50s ribosomal protein l19 | CJ240_02465 | Not Available | Positive | 583505 - 583855 | 13179.8 |
| signal peptidase i | CJ240_02470 | Not Available | Positive | 583932 - 584699 | 28155.0 |
| ribonuclease hii | CJ240_02475 | Not Available | Positive | 584815 - 585540 | 25317.1 |
| duf2469 domain-containing protein | CJ240_02480 | Not Available | Positive | 585537 - 585842 | 12114.3 |
| peroxiredoxin | CJ240_02485 | Not Available | Positive | 585951 - 586514 | 21002.4 |
| alkyl hydroperoxide reductase subunit f | CJ240_02490 | Not Available | Positive | 586517 - 588073 | 56149.4 |
| yran family protein | CJ240_02495 | Not Available | Positive | 588234 - 588602 | 13656.6 |
| atp-binding protein | CJ240_02500 | Not Available | Positive | 588604 - 590157 | 55597.9 |
| dna-protecting protein dpra | CJ240_02505 | Not Available | Positive | 590170 - 591357 | 42460.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
