Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | CJ240_02410 | Not Available | Positive | 570130 - 570579 | 16443.5 |
| chromosome segregation protein smc | CJ240_02415 | Not Available | Positive | 570593 - 574270 | 133454.0 |
| hypothetical protein | CJ240_02420 | Not Available | Positive | 574354 - 575118 | 27921.5 |
| signal recognition particle-docking protein ftsy | CJ240_02425 | Not Available | Positive | 575207 - 576532 | 46205.9 |
| signal recognition particle protein | CJ240_02430 | Not Available | Positive | 576568 - 578154 | 56941.9 |
| amidohydrolase | CJ240_02435 | Not Available | Positive | 578151 - 579269 | 40948.5 |
| inositol monophosphatase | CJ240_02440 | Not Available | Positive | 579294 - 580346 | 38194.0 |
| 30s ribosomal protein s16 | CJ240_02445 | Not Available | Positive | 580637 - 581128 | 18150.3 |
| kh domain-containing protein | CJ240_02450 | Not Available | Positive | 581131 - 581379 | 9210.22 |
| 16s rrna processing protein rimm | CJ240_02455 | Not Available | Positive | 581451 - 581954 | 17930.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
