Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerate kinase | CJ240_02310 | Not Available | Negative | 539090 - 540223 | 39261.9 |
| hypothetical protein | CJ240_02315 | Not Available | Positive | 540303 - 540464 | 6714.28 |
| hypothetical protein | CJ240_02320 | Not Available | Positive | 540583 - 541203 | 23039.6 |
| hypothetical protein | CJ240_02325 | Not Available | Negative | 541266 - 541343 | 2971.72 |
| amidohydrolase | CJ240_02330 | Not Available | Negative | 541399 - 542616 | 43569.5 |
| hypothetical protein | CJ240_02335 | Not Available | Positive | 542693 - 542983 | 10354.7 |
| hypothetical protein | CJ240_02340 | Not Available | Positive | 543156 - 546671 | 128308.0 |
| mfs transporter | CJ240_02345 | Not Available | Negative | 546920 - 548110 | 42236.2 |
| collagen-binding protein | CJ240_02350 | Not Available | Negative | 548172 - 550721 | 89185.6 |
| hypothetical protein | CJ240_02355 | Not Available | Positive | 551059 - 551469 | 14583.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
