Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | CJ240_02260 | Not Available | Positive | 528261 - 528881 | 22371.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | CJ240_02265 | Not Available | Negative | 529283 - 530266 | 34404.1 |
| septum formation protein maf | CJ240_02270 | Not Available | Negative | 530284 - 531006 | 26013.4 |
| adenylate/guanylate cyclase domain-containing protein | CJ240_02275 | Not Available | Positive | 531219 - 532319 | 40511.8 |
| dna-binding response regulator | CJ240_02280 | Not Available | Positive | 532380 - 533060 | 24908.9 |
| sensor histidine kinase | CJ240_02285 | Not Available | Positive | 533088 - 534389 | 47090.0 |
| duf4032 domain-containing protein | CJ240_02290 | Not Available | Negative | 534500 - 535762 | 47658.8 |
| serine/threonine protein kinase | CJ240_02295 | Not Available | Positive | 535892 - 537640 | 62244.1 |
| hypothetical protein | CJ240_02300 | Not Available | Positive | 537706 - 538665 | 34077.1 |
| Trna-thr | Not Available | Not Available | Positive | 539003 - 539078 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
