Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase ii | CJ240_02160 | Not Available | Positive | 510642 - 511184 | 19369.2 |
| rna pseudouridine synthase | CJ240_02165 | Not Available | Positive | 511177 - 512097 | 33021.2 |
| hypothetical protein | CJ240_02170 | Not Available | Positive | 512121 - 512966 | 28999.6 |
| hypothetical protein | CJ240_02175 | Not Available | Positive | 512974 - 514602 | 57010.7 |
| dna polymerase iii subunit delta | CJ240_02180 | Not Available | Positive | 514584 - 515552 | 34239.1 |
| transcriptional repressor | CJ240_02185 | Not Available | Positive | 515589 - 515984 | 14904.5 |
| rna methyltransferase | CJ240_02190 | Not Available | Negative | 516009 - 516818 | 27993.8 |
| 50s ribosomal protein l20 | CJ240_02195 | Not Available | Negative | 516864 - 517244 | 14723.9 |
| 50s ribosomal protein l35 | CJ240_02200 | Not Available | Negative | 517266 - 517466 | 7538.37 |
| translation initiation factor if-3 | CJ240_02205 | Not Available | Negative | 517529 - 518185 | 24906.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
