Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine adenosyltransferase | CJ240_02110 | Not Available | Positive | 500176 - 501369 | 42859.6 |
| preprotein translocase subunit seca | CJ240_02115 | Not Available | Positive | 501533 - 504310 | 104126.0 |
| hypothetical protein | CJ240_02120 | Not Available | Negative | 504460 - 505083 | 22429.6 |
| hypothetical protein | CJ240_02125 | Not Available | Positive | 505376 - 505915 | 19447.8 |
| hit family protein | CJ240_02130 | Not Available | Negative | 505912 - 506340 | 15556.7 |
| cell division protein ftsz | CJ240_02135 | Not Available | Positive | 506534 - 507874 | 47171.7 |
| peptidoglycan editing factor pgef | CJ240_02140 | Not Available | Positive | 507881 - 508627 | 26219.6 |
| cell division protein sepf | CJ240_02145 | Not Available | Positive | 508737 - 509201 | 16956.9 |
| yggt family protein | CJ240_02150 | Not Available | Positive | 509205 - 509534 | 12533.3 |
| diviva domain-containing protein | CJ240_02155 | Not Available | Positive | 509717 - 510517 | 29560.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
