Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_02060 | Not Available | Negative | 486339 - 488321 | 69626.8 |
| hypothetical protein | CJ240_02065 | Not Available | Negative | 488410 - 491457 | 107518.0 |
| cold shock domain-containing protein | CJ240_02070 | Not Available | Positive | 491590 - 491967 | 13521.2 |
| duf3027 domain-containing protein | CJ240_02075 | Not Available | Positive | 491996 - 492769 | 28687.9 |
| permease | CJ240_02080 | Not Available | Positive | 492893 - 494368 | 51210.7 |
| phosphoserine transaminase | CJ240_02085 | Not Available | Negative | 494495 - 495637 | 40606.2 |
| metal-dependent transcriptional regulator | CJ240_02090 | Not Available | Positive | 495799 - 496485 | 25528.6 |
| nlpc/p60 family protein | CJ240_02095 | Not Available | Positive | 496754 - 497488 | 24818.4 |
| hypothetical protein | CJ240_02100 | Not Available | Positive | 497617 - 497859 | 9128.9 |
| universal stress protein | CJ240_02105 | Not Available | Positive | 497899 - 498804 | 31170.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
