Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | CJ240_02010 | Not Available | Positive | 474937 - 475923 | 36536.1 |
| udp-n-acetylglucosamine--lps n-acetylglucosamine transferase | CJ240_02015 | Not Available | Positive | 475916 - 476368 | 16906.8 |
| hypothetical protein | CJ240_02020 | Not Available | Positive | 476365 - 476901 | 19675.6 |
| udp-galactopyranose mutase | CJ240_02025 | Not Available | Positive | 476966 - 478141 | 45294.6 |
| sugar abc transporter permease | CJ240_02030 | Not Available | Positive | 478145 - 479011 | 32932.8 |
| abc transporter atp-binding protein | CJ240_02035 | Not Available | Positive | 479016 - 479783 | 27952.0 |
| carbamoyl phosphate synthase small subunit | CJ240_02040 | Not Available | Positive | 479983 - 481188 | 43094.9 |
| carbamoyl-phosphate synthase large subunit | CJ240_02045 | Not Available | Positive | 481172 - 484453 | 118016.0 |
| sulfite exporter taue/safe family protein | CJ240_02050 | Not Available | Positive | 484456 - 485343 | 30562.1 |
| hypothetical protein | CJ240_02055 | Not Available | Negative | 485557 - 486270 | 26413.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
