Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family dna-binding transcriptional regulator | CJ240_01960 | Not Available | Positive | 464144 - 464575 | 16162.7 |
| hypothetical protein | CJ240_01965 | Not Available | Positive | 464615 - 465592 | 34147.8 |
| atp-dependent chaperone clpb | CJ240_01970 | Not Available | Positive | 465816 - 468437 | 96162.9 |
| tetr/acrr family transcriptional regulator | CJ240_01975 | Not Available | Positive | 468721 - 469716 | 36289.2 |
| penicillin-binding protein | CJ240_01980 | Not Available | Positive | 469729 - 470592 | 31338.3 |
| exodeoxyribonuclease iii | CJ240_01985 | Not Available | Negative | 470598 - 471389 | 29792.1 |
| orotate phosphoribosyltransferase | CJ240_01990 | Not Available | Positive | 471431 - 472006 | 20135.2 |
| kr domain-containing protein | CJ240_01995 | Not Available | Positive | 472009 - 472782 | 27975.1 |
| rna methyltransferase | CJ240_02000 | Not Available | Positive | 472787 - 473398 | 22634.4 |
| class ii fructose-bisphosphate aldolase | CJ240_02005 | Not Available | Positive | 473548 - 474573 | 37034.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
