Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase (nadp(+)) | CJ240_01910 | Not Available | Positive | 450717 - 451943 | 45658.4 |
| hypothetical protein | CJ240_01915 | Not Available | Positive | 452150 - 452992 | 29905.3 |
| 6-phosphofructokinase | CJ240_01920 | Not Available | Positive | 453015 - 455282 | 82364.6 |
| glucose-6-phosphate isomerase | CJ240_01925 | Not Available | Positive | 455310 - 457007 | 62197.3 |
| hypothetical protein | CJ240_01930 | Not Available | Negative | 457277 - 458404 | 41645.4 |
| aldo/keto reductase | CJ240_01935 | Not Available | Negative | 458416 - 459264 | 31675.4 |
| n-acetyltransferase | CJ240_01940 | Not Available | Negative | 459509 - 459937 | 15854.0 |
| molecular chaperone dnak | CJ240_01945 | Not Available | Positive | 460341 - 462218 | 67542.2 |
| nucleotide exchange factor grpe | CJ240_01950 | Not Available | Positive | 462492 - 463103 | 21743.1 |
| molecular chaperone dnaj | CJ240_01955 | Not Available | Positive | 463125 - 464132 | 34511.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
