Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit epsilon | CJ240_01810 | Not Available | Positive | 432427 - 432684 | 8832.71 |
| hypothetical protein | CJ240_01815 | Not Available | Positive | 432723 - 433142 | 15895.3 |
| endonuclease nucs | CJ240_01820 | Not Available | Positive | 433209 - 433907 | 25740.0 |
| n-acetylglucosamine-6-phosphate deacetylase | CJ240_01825 | Not Available | Positive | 433948 - 435168 | 42047.5 |
| hypothetical protein | CJ240_01830 | Not Available | Positive | 435220 - 435450 | 8706.32 |
| alpha/beta hydrolase | CJ240_01835 | Not Available | Positive | 435516 - 436334 | 29094.6 |
| act domain-containing protein | CJ240_01840 | Not Available | Positive | 436532 - 436945 | 15059.0 |
| dna methyltransferase | CJ240_01845 | Not Available | Negative | 436968 - 438017 | 39050.4 |
| duf4921 domain-containing protein | CJ240_01850 | Not Available | Positive | 438131 - 439477 | 50224.6 |
| csbd family protein | CJ240_01855 | Not Available | Negative | 439611 - 439856 | 8415.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
