Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-forming succinate--coa ligase subunit beta | CJ240_01710 | Not Available | Positive | 410020 - 411186 | 41227.6 |
| succinate--coa ligase subunit alpha | CJ240_01715 | Not Available | Positive | 411216 - 412148 | 31683.4 |
| hypothetical protein | CJ240_01720 | Not Available | Positive | 412405 - 414639 | 80960.9 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | CJ240_01725 | Not Available | Positive | 414774 - 416384 | 57327.8 |
| hypothetical protein | CJ240_01730 | Not Available | Positive | 416568 - 418700 | 78729.8 |
| hypothetical protein | CJ240_01735 | Not Available | Negative | 418750 - 420231 | 52426.2 |
| 50s ribosomal protein l31 | CJ240_01740 | Not Available | Positive | 420548 - 420766 | 8121.79 |
| peptide chain release factor 1 | CJ240_01745 | Not Available | Positive | 421002 - 422042 | 38393.1 |
| peptide chain release factor n(5)-glutamine methyltransferase | CJ240_01750 | Not Available | Positive | 422062 - 422916 | 31624.0 |
| hypothetical protein | CJ240_01755 | Not Available | Positive | 422993 - 423397 | 14209.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
