Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CJ240_01610 | Not Available | Positive | 384025 - 384588 | 20275.5 |
| oligopeptide transporter, opt family | CJ240_01615 | Not Available | Negative | 384772 - 386715 | 67128.5 |
| duf1440 domain-containing protein | CJ240_01620 | Not Available | Positive | 386981 - 387535 | 20746.3 |
| hypothetical protein | CJ240_01625 | Not Available | Negative | 387563 - 387742 | 6730.34 |
| hypothetical protein | CJ240_01630 | Not Available | Positive | 388116 - 388868 | 25986.4 |
| hypothetical protein | CJ240_01635 | Not Available | Positive | 388972 - 392043 | 114096.0 |
| type i-e crispr-associated protein cse1/casa | CJ240_01640 | Not Available | Positive | 392177 - 393901 | 64192.5 |
| type i-e crispr-associated protein cse2/casb | CJ240_01645 | Not Available | Positive | 393894 - 394526 | 23317.7 |
| hypothetical protein | CJ240_01650 | Not Available | Positive | 394538 - 395149 | 23239.0 |
| hypothetical protein | CJ240_01655 | Not Available | Positive | 395101 - 395595 | 18339.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
