Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopentenyl-diphosphate delta-isomerase | CJ240_01560 | Not Available | Positive | 368954 - 370684 | 62145.2 |
| d-serine/d-alanine/glycine transporter | CJ240_01565 | Not Available | Negative | 371023 - 372510 | 53777.6 |
| protein tyrosine phosphatase | CJ240_01570 | Not Available | Negative | 372699 - 373184 | 18369.5 |
| guab1 family imp dehydrogenase-related protein | CJ240_01575 | Not Available | Negative | 373235 - 374674 | 50465.1 |
| phosphoribosyltransferase | CJ240_01580 | Not Available | Positive | 374850 - 375380 | 19135.1 |
| sprt domain-containing protein | CJ240_01585 | Not Available | Positive | 375415 - 375945 | 19817.8 |
| hypothetical protein | CJ240_01590 | Not Available | Positive | 375996 - 377423 | 51343.1 |
| atp-dependent rna helicase hrpa | CJ240_01595 | Not Available | Negative | 377434 - 382239 | 177230.0 |
| fad-dependent oxidoreductase | CJ240_01600 | Not Available | Positive | 382367 - 383662 | 46579.0 |
| ferredoxin | CJ240_01605 | Not Available | Positive | 383664 - 383960 | 10834.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
