Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_01510 | Not Available | Negative | 357065 - 358525 | 51344.0 |
| hypothetical protein | CJ240_01515 | Not Available | Positive | 358905 - 360725 | 65535.0 |
| hypothetical protein | CJ240_01520 | Not Available | Positive | 360838 - 362025 | 41864.0 |
| hypothetical protein | CJ240_01525 | Not Available | Negative | 362087 - 362929 | 30349.6 |
| hypothetical protein | CJ240_01530 | Not Available | Negative | 363053 - 363910 | 30041.4 |
| s-ribosylhomocysteine lyase | CJ240_01535 | Not Available | Negative | 363924 - 364385 | 17358.5 |
| nrdh-redoxin | CJ240_01540 | Not Available | Positive | 364774 - 365022 | 8810.58 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | CJ240_01545 | Not Available | Positive | 365185 - 365580 | 14855.2 |
| ribonucleotide-diphosphate reductase subunit alpha | CJ240_01550 | Not Available | Positive | 365565 - 367721 | 82252.8 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | CJ240_01555 | Not Available | Negative | 367860 - 368822 | 36686.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
