Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s3 | CJ240_01460 | Not Available | Positive | 347330 - 348226 | 32755.7 |
| 50s ribosomal protein l16 | CJ240_01465 | Not Available | Positive | 348228 - 348647 | 15909.4 |
| 50s ribosomal protein l29 | CJ240_01470 | Not Available | Positive | 348647 - 348877 | 8633.3 |
| 30s ribosomal protein s17 | CJ240_01475 | Not Available | Positive | 348883 - 349167 | 11155.5 |
| gfo/idh/moca family oxidoreductase | CJ240_01480 | Not Available | Positive | 349468 - 350667 | 43376.2 |
| mfs transporter | CJ240_01485 | Not Available | Positive | 350759 - 352351 | 56933.7 |
| sulfite exporter taue/safe family protein | CJ240_01490 | Not Available | Negative | 352858 - 353613 | 26942.5 |
| alcohol dehydrogenase | CJ240_01495 | Not Available | Positive | 354030 - 355157 | 39421.7 |
| hypothetical protein | CJ240_01500 | Not Available | Negative | 355648 - 355878 | 7742.65 |
| had family hydrolase | CJ240_01505 | Not Available | Positive | 356317 - 357075 | 27165.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
