Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | CJ240_01355 | Not Available | Negative | 323805 - 324827 | 36542.9 |
| trpb-like pyridoxal phosphate-dependent enzyme | CJ240_01360 | Not Available | Positive | 325161 - 326465 | 47281.2 |
| hypothetical protein | CJ240_01365 | Not Available | Negative | 326548 - 328152 | 57360.6 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | CJ240_01370 | Not Available | Positive | 328655 - 329746 | 40005.9 |
| o-succinylbenzoate synthase | CJ240_01375 | Not Available | Positive | 329885 - 330943 | 38301.8 |
| hypothetical protein | CJ240_01380 | Not Available | Positive | 330940 - 333099 | 76017.2 |
| hypothetical protein | CJ240_01385 | Not Available | Negative | 333288 - 334163 | 31180.6 |
| isochorismate synthase | CJ240_01390 | Not Available | Negative | 334581 - 336050 | 52966.1 |
| 30s ribosomal protein s12 | CJ240_01395 | Not Available | Positive | 336385 - 336759 | 13727.9 |
| 30s ribosomal protein s7 | CJ240_01400 | Not Available | Positive | 336761 - 337231 | 17761.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
