Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-glucose phosphate-specific phosphoglucomutase | CJ240_01305 | Not Available | Negative | 312689 - 314359 | 59811.0 |
| pp_00256 | CJ240_01310 | Not Available | Positive | 314465 - 315022 | Not Available |
| n-acetylmuramoyl-l-alanine amidase | CJ240_01315 | Not Available | Negative | 315109 - 315975 | 30112.9 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | CJ240_01320 | Not Available | Positive | 316292 - 317794 | 53703.2 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | CJ240_01325 | Not Available | Negative | 317810 - 318379 | 20433.1 |
| pyridoxal 5'-phosphate synthase lyase subunit pdxs | CJ240_01330 | Not Available | Negative | 318416 - 319330 | 32603.5 |
| sugar phosphate isomerase/epimerase | CJ240_01335 | Not Available | Positive | 319740 - 320606 | 33591.6 |
| laci family transcriptional regulator | CJ240_01340 | Not Available | Positive | 320859 - 321893 | 38439.9 |
| abc transporter | CJ240_01345 | Not Available | Negative | 322060 - 322887 | 29983.9 |
| abc transporter permease | CJ240_01350 | Not Available | Negative | 323068 - 323808 | 26095.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
