Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts glucose transporter subunit iia | CJ240_01255 | Not Available | Positive | 300408 - 300905 | 17730.6 |
| hypothetical protein | CJ240_01260 | Not Available | Positive | 301068 - 302681 | 58043.2 |
| alpha/beta hydrolase | CJ240_01265 | Not Available | Negative | 303030 - 303935 | 33215.8 |
| protoporphyrinogen oxidase | CJ240_01270 | Not Available | Positive | 304004 - 304327 | 11527.8 |
| rubrerythrin family protein | CJ240_01275 | Not Available | Positive | 304329 - 305438 | 39778.1 |
| hypothetical protein | CJ240_01280 | Not Available | Negative | 305444 - 306271 | 29322.0 |
| mfs transporter | CJ240_01285 | Not Available | Negative | 306437 - 308440 | 70338.9 |
| transcriptional regulator | CJ240_01290 | Not Available | Negative | 308480 - 308965 | 18114.3 |
| hnh endonuclease | CJ240_01295 | Not Available | Negative | 309072 - 309863 | 28905.1 |
| atp-dependent helicase hrpb | CJ240_01300 | Not Available | Positive | 309957 - 312614 | 96800.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
