Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate kinase | CJ240_01200 | Not Available | Negative | 289875 - 291470 | 57676.0 |
| tetr/acrr family transcriptional regulator | CJ240_01205 | Not Available | Negative | 291470 - 292108 | 24230.9 |
| aspartate aminotransferase family protein | CJ240_01210 | Not Available | Positive | 292371 - 293828 | 53321.4 |
| class ii aldolase family protein | CJ240_01215 | Not Available | Positive | 293804 - 294871 | 39057.6 |
| aldehyde dehydrogenase family protein | CJ240_01220 | Not Available | Positive | 294931 - 296340 | 52240.4 |
| carbonic anhydrase | CJ240_01225 | Not Available | Negative | 296429 - 296914 | 17882.5 |
| Trna-ala | Not Available | Not Available | Positive | 297065 - 297137 | Not Available |
| hypothetical protein | CJ240_01240 | Not Available | Positive | 297799 - 297990 | 7399.07 |
| n-acetyltransferase | CJ240_01245 | Not Available | Positive | 298556 - 299236 | 24904.4 |
| restriction endonuclease | CJ240_01250 | Not Available | Positive | 299305 - 300237 | 35008.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
