Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated translation inhibitor raia | CJ240_01150 | Not Available | Positive | 276891 - 277559 | 25657.3 |
| hypothetical protein | CJ240_01155 | Not Available | Negative | 277722 - 279173 | 51873.0 |
| transporter | CJ240_01160 | Not Available | Negative | 279315 - 280916 | 56031.8 |
| acetolactate synthase large subunit | CJ240_01165 | Not Available | Positive | 281297 - 283081 | 63250.7 |
| acetolactate synthase small subunit | CJ240_01170 | Not Available | Positive | 283087 - 283599 | 18790.8 |
| ketol-acid reductoisomerase | CJ240_01175 | Not Available | Positive | 283602 - 284627 | 37211.7 |
| 3-isopropylmalate dehydrogenase | CJ240_01180 | Not Available | Positive | 284788 - 285843 | 37386.4 |
| branched chain amino acid aminotransferase | CJ240_01185 | Not Available | Positive | 285952 - 287109 | 41797.0 |
| dihydroxy-acid dehydratase | CJ240_01190 | Not Available | Positive | 287217 - 289088 | 66417.4 |
| gtra family protein | CJ240_01195 | Not Available | Negative | 289384 - 289878 | 18010.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
