Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage major capsid protein | CJ240_03525 | Not Available | Negative | 806562 - 807779 | 44353.5 |
| Putative clp peptidase | CJ240_03530 | Not Available | Negative | 807802 - 808686 | 31558.3 |
| Gp4, phage portal protein, hk97 family | CJ240_03535 | Not Available | Negative | 808683 - 809999 | 49093.3 |
| hypothetical protein | CJ240_03540 | Not Available | Positive | 810058 - 810525 | 17688.5 |
| Terminase large subunit | CJ240_03545 | Not Available | Negative | 810511 - 812115 | 60459.7 |
| hypothetical protein | CJ240_03550 | Not Available | Negative | 812191 - 812484 | 10592.4 |
| hypothetical protein | CJ240_03555 | Not Available | Negative | 812663 - 812998 | 12512.6 |
| virulence protein | CJ240_03560 | Not Available | Negative | 813105 - 813557 | 16776.3 |
| hypothetical protein | CJ240_03565 | Not Available | Negative | 813551 - 813766 | 8317.63 |
| Gp105 | CJ240_03570 | Not Available | Negative | 813855 - 814334 | 17339.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
