Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_01050 | Not Available | Positive | 252411 - 253025 | 21515.3 |
| chaperonin groel | CJ240_01055 | Not Available | Positive | 253334 - 254968 | 57528.7 |
| wxg100 family type vii secretion target | CJ240_01060 | Not Available | Negative | 255141 - 255431 | 9487.93 |
| hypothetical protein | CJ240_01065 | Not Available | Negative | 255652 - 256740 | 40305.4 |
| sensor histidine kinase | CJ240_01070 | Not Available | Negative | 256883 - 258523 | 58825.0 |
| dna-binding response regulator | CJ240_01075 | Not Available | Negative | 258523 - 259227 | 26049.1 |
| hypothetical protein | CJ240_01080 | Not Available | Positive | 259376 - 260227 | 30286.2 |
| lysine--trna ligase | CJ240_01085 | Not Available | Positive | 260278 - 261819 | 57057.7 |
| epoxyalkane--coenzyme m transferase | CJ240_01090 | Not Available | Positive | 261894 - 263081 | 43745.4 |
| mannose-6-phosphate isomerase, class i | CJ240_01095 | Not Available | Positive | 263101 - 264285 | 42086.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
