Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | CJ240_01000 | Not Available | Positive | 238163 - 239965 | 67381.9 |
| exo-alpha-sialidase | CJ240_01005 | Not Available | Positive | 239992 - 241536 | 55643.0 |
| atp-dependent dna helicase pcra | CJ240_01010 | Not Available | Positive | 241557 - 244193 | 95877.0 |
| malate dehydrogenase | CJ240_01015 | Not Available | Negative | 244339 - 245337 | 34819.5 |
| gtra family protein | CJ240_01020 | Not Available | Negative | 245582 - 245953 | 13884.2 |
| hypothetical protein | CJ240_01025 | Not Available | Negative | 246038 - 247537 | 52925.1 |
| udp-glucose 4-epimerase gale | CJ240_01030 | Not Available | Positive | 247704 - 248693 | 35990.9 |
| lytr family transcriptional regulator | CJ240_01035 | Not Available | Negative | 248828 - 249880 | 38040.4 |
| lytr family transcriptional regulator | CJ240_01040 | Not Available | Negative | 250270 - 251592 | 47599.6 |
| uracil-dna glycosylase | CJ240_01045 | Not Available | Negative | 251644 - 252306 | 24111.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
