Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | CJ240_00950 | Not Available | Positive | 224581 - 226269 | 62467.1 |
| hypothetical protein | CJ240_00955 | Not Available | Positive | 226469 - 227062 | 20202.8 |
| transcription-repair coupling factor | CJ240_00960 | Not Available | Positive | 227353 - 230919 | 129918.0 |
| hypothetical protein | CJ240_00965 | Not Available | Positive | 230979 - 231683 | 25505.4 |
| phosphopyruvate hydratase | CJ240_00970 | Not Available | Positive | 231786 - 233072 | 45719.9 |
| hypothetical protein | CJ240_00975 | Not Available | Positive | 233122 - 233832 | 26579.9 |
| duf501 domain-containing protein | CJ240_00980 | Not Available | Positive | 233829 - 234356 | 18262.9 |
| ppx/gppa family phosphatase | CJ240_00985 | Not Available | Positive | 234441 - 235439 | 35507.5 |
| phospholipid carrier-dependent glycosyltransferase | CJ240_00990 | Not Available | Negative | 235483 - 237399 | 71135.0 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | CJ240_00995 | Not Available | Positive | 237251 - 238111 | 30880.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
