Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) synthase | CJ240_00900 | Not Available | Positive | 213073 - 215181 | 75326.7 |
| aminopeptidase | CJ240_00905 | Not Available | Positive | 215420 - 216796 | 52329.0 |
| hypothetical protein | CJ240_00910 | Not Available | Negative | 216793 - 217080 | 10498.3 |
| mfs transporter | CJ240_00915 | Not Available | Positive | 217140 - 218408 | 44532.1 |
| type ii toxin-antitoxin system antitoxin, relb/dinj family | CJ240_00920 | Not Available | Positive | 218634 - 218936 | 11011.2 |
| type ii toxin-antitoxin system rele/pare family toxin | CJ240_00925 | Not Available | Positive | 218936 - 219274 | 13684.7 |
| diaminopimelate decarboxylase | CJ240_00930 | Not Available | Positive | 219439 - 220824 | 48520.0 |
| homoserine dehydrogenase | CJ240_00935 | Not Available | Positive | 220919 - 222214 | 45555.4 |
| threonine synthase | CJ240_00940 | Not Available | Positive | 222218 - 223321 | 38218.4 |
| homoserine kinase | CJ240_00945 | Not Available | Positive | 223337 - 224347 | 36463.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
