Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trka family potassium uptake protein | CJ240_00850 | Not Available | Positive | 204583 - 205251 | 23556.4 |
| potassium transporter trk | CJ240_00855 | Not Available | Negative | 205400 - 206776 | 49085.3 |
| helix-turn-helix domain-containing protein | CJ240_00860 | Not Available | Positive | 207112 - 207327 | 7729.37 |
| aurkaip1/cox24 domain-containing protein | CJ240_00865 | Not Available | Positive | 207420 - 207518 | 4099.36 |
| whib family transcriptional regulator | CJ240_00870 | Not Available | Negative | 207626 - 207928 | 11516.4 |
| imp dehydrogenase | CJ240_00875 | Not Available | Positive | 208279 - 209781 | 53191.9 |
| dna polymerase iii subunit epsilon | CJ240_00880 | Not Available | Positive | 209864 - 210526 | 25209.9 |
| hypothetical protein | CJ240_00885 | Not Available | Positive | 210736 - 211827 | 37700.3 |
| had family hydrolase | CJ240_00890 | Not Available | Negative | 211831 - 212664 | 30254.9 |
| Trna-arg | Not Available | Not Available | Positive | 212879 - 212954 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
