Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | CJ240_00800 | Not Available | Positive | 193076 - 194518 | 49836.3 |
| trna lysidine(34) synthetase tils | CJ240_00805 | Not Available | Positive | 194515 - 195600 | 38963.9 |
| hypoxanthine phosphoribosyltransferase | CJ240_00810 | Not Available | Positive | 195610 - 196161 | 20119.2 |
| cell division protein ftsh | CJ240_00815 | Not Available | Positive | 196333 - 198330 | 72735.4 |
| gtp cyclohydrolase i fole | CJ240_00820 | Not Available | Positive | 198334 - 198900 | 20911.4 |
| dihydropteroate synthase | CJ240_00825 | Not Available | Positive | 198997 - 199881 | 30811.8 |
| hypothetical protein | CJ240_00830 | Not Available | Positive | 199872 - 201908 | 73045.0 |
| hypothetical protein | CJ240_00835 | Not Available | Positive | 201913 - 202407 | 17150.6 |
| hypothetical protein | CJ240_00840 | Not Available | Positive | 202430 - 203035 | 22384.9 |
| dna repair protein rada | CJ240_00845 | Not Available | Negative | 203091 - 204482 | 48756.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
