Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail associated lysozyme | CJ240_03475 | Not Available | Negative | 797212 - 799917 | 97816.1 |
| Distal tail protein | CJ240_03480 | Not Available | Negative | 799931 - 800617 | 24293.3 |
| Tapemeasure protein | CJ240_03485 | Not Available | Negative | 800622 - 803300 | 92886.3 |
| hypothetical protein | CJ240_03490 | Not Available | Positive | 803348 - 803809 | 17859.4 |
| Hypothetical protein | CJ240_03495 | Not Available | Negative | 804021 - 804449 | 15609.5 |
| Major tail protein | CJ240_03500 | Not Available | Negative | 804465 - 805073 | 21371.1 |
| Hypothetical protein | CJ240_03505 | Not Available | Negative | 805086 - 805433 | 13006.4 |
| hypothetical protein | CJ240_03510 | Not Available | Negative | 805430 - 805867 | 15504.5 |
| head-tail adaptor protein | CJ240_03515 | Not Available | Negative | 805867 - 806199 | 12156.9 |
| phage gp6-like head-tail connector protein | CJ240_03520 | Not Available | Negative | 806215 - 806532 | 11841.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
