Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | CJ240_00600 | Not Available | Negative | 149607 - 150641 | 38258.6 |
| rna degradosome polyphosphate kinase | CJ240_00605 | Not Available | Negative | 150765 - 153563 | 103648.0 |
| hypothetical protein | CJ240_00610 | Not Available | Negative | 153626 - 154249 | 22935.3 |
| pyridine nucleotide-disulfide oxidoreductase | CJ240_00615 | Not Available | Positive | 154466 - 155905 | 52202.6 |
| zinc metalloprotease htpx | CJ240_00620 | Not Available | Negative | 156030 - 156911 | 31484.4 |
| hypothetical protein | CJ240_00625 | Not Available | Negative | 157123 - 159969 | 101077.0 |
| abc transporter | CJ240_00630 | Not Available | Negative | 159970 - 161187 | 42657.4 |
| hypothetical protein | CJ240_00635 | Not Available | Negative | 161297 - 162925 | 60510.3 |
| hypothetical protein | CJ240_00640 | Not Available | Negative | 162926 - 163633 | 25528.0 |
| two-component sensor histidine kinase | CJ240_00645 | Not Available | Positive | 164149 - 165018 | 30751.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
