Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_00550 | Not Available | Positive | 124907 - 134626 | 345728.0 |
| hypothetical protein | CJ240_00555 | Not Available | Negative | 135228 - 135737 | 18979.3 |
| peptidylprolyl isomerase | CJ240_00560 | Not Available | Positive | 135911 - 136420 | 18340.5 |
| rhomboid family intramembrane serine protease | CJ240_00565 | Not Available | Positive | 136471 - 137184 | 25318.7 |
| atp-dependent clp protease atp-binding subunit | CJ240_00570 | Not Available | Positive | 137406 - 139880 | 91870.8 |
| hypothetical protein | CJ240_00575 | Not Available | Positive | 139976 - 140746 | 28388.2 |
| hypothetical protein | CJ240_00580 | Not Available | Positive | 140739 - 142982 | 78556.1 |
| 1-pyrroline-5-carboxylate dehydrogenase | CJ240_00585 | Not Available | Negative | 143143 - 146637 | 127469.0 |
| sodium/proline symporter putp | CJ240_00590 | Not Available | Negative | 146807 - 148498 | 60100.9 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | CJ240_00595 | Not Available | Negative | 148909 - 149493 | 19997.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
