Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_00500 | Not Available | Positive | 113003 - 114358 | 48448.6 |
| hypothetical protein | CJ240_00505 | Not Available | Negative | 114367 - 115797 | 52919.1 |
| 2-oxoacid:acceptor oxidoreductase | CJ240_00510 | Not Available | Positive | 116079 - 116654 | 19937.1 |
| pyruvate ferredoxin oxidoreductase | CJ240_00515 | Not Available | Positive | 116656 - 117921 | 45642.8 |
| pyruvate ferredoxin oxidoreductase | CJ240_00520 | Not Available | Positive | 117944 - 119197 | 45247.6 |
| fad-dependent oxidoreductase | CJ240_00525 | Not Available | Positive | 119194 - 120852 | 60377.7 |
| hypothetical protein | CJ240_00530 | Not Available | Negative | 121050 - 121994 | 33090.2 |
| hypothetical protein | CJ240_00535 | Not Available | Positive | 122082 - 122837 | 27492.1 |
| folate-binding protein ygfz | CJ240_00540 | Not Available | Positive | 122840 - 123955 | 39852.1 |
| d-tyrosyl-trna(tyr) deacylase | CJ240_00545 | Not Available | Positive | 123965 - 124399 | 15642.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
