Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_00400 | Not Available | Negative | 92604 - 95051 | 85427.9 |
| dihydroxyacetone kinase subunit l | CJ240_00405 | Not Available | Negative | 95073 - 95684 | 20759.6 |
| dihydroxyacetone kinase subunit dhak | CJ240_00410 | Not Available | Negative | 95687 - 96688 | 34997.9 |
| mfs transporter | CJ240_00415 | Not Available | Negative | 96811 - 98223 | 50017.9 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | CJ240_00420 | Not Available | Negative | 98236 - 99009 | 27036.4 |
| card family transcriptional regulator | CJ240_00425 | Not Available | Negative | 99027 - 99542 | 19142.8 |
| hypothetical protein | CJ240_00430 | Not Available | Negative | 99732 - 100865 | 41148.9 |
| penicillin-binding protein | CJ240_00435 | Not Available | Negative | 100869 - 103070 | 78764.4 |
| whib family transcriptional regulator | CJ240_00440 | Not Available | Positive | 103257 - 103586 | 12523.6 |
| duf4177 domain-containing protein | CJ240_00445 | Not Available | Positive | 103614 - 103775 | 6025.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
