Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | CJ240_00350 | Not Available | Positive | 78397 - 79875 | 53537.6 |
| abc transporter permease | CJ240_00355 | Not Available | Positive | 79868 - 80830 | 33407.9 |
| beta-galactosidase | CJ240_00360 | Not Available | Positive | 80887 - 82932 | 76390.3 |
| hypothetical protein | CJ240_00365 | Not Available | Positive | 82950 - 83729 | 28505.5 |
| laci family transcriptional regulator | CJ240_00370 | Not Available | Negative | 83883 - 84986 | 39493.8 |
| high-affinity choline transporter bett | CJ240_00375 | Not Available | Positive | 85099 - 87168 | 75247.7 |
| hypothetical protein | CJ240_00380 | Not Available | Positive | 87359 - 87727 | 13632.2 |
| copper-translocating p-type atpase | CJ240_00385 | Not Available | Negative | 87761 - 89962 | 76675.2 |
| Trna-thr | Not Available | Not Available | Positive | 90172 - 90244 | Not Available |
| hypothetical protein | CJ240_00395 | Not Available | Negative | 90270 - 92378 | 76771.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
