Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | CJ240_00300 | Not Available | Negative | 69454 - 69957 | 18646.3 |
| cca trna nucleotidyltransferase | CJ240_00305 | Not Available | Positive | 70137 - 71546 | 52781.5 |
| dtmp kinase | CJ240_00310 | Not Available | Positive | 71632 - 72381 | 27128.2 |
| dna polymerase iii subunit delta' | CJ240_00315 | Not Available | Positive | 72378 - 73571 | 43676.8 |
| alpha/beta hydrolase | CJ240_00320 | Not Available | Positive | 73575 - 75140 | 56163.4 |
| hypothetical protein | CJ240_00325 | Not Available | Positive | 75158 - 75676 | 18052.1 |
| crcb family protein | CJ240_00330 | Not Available | Positive | 75676 - 76065 | 13417.6 |
| Trna-pro | Not Available | Not Available | Positive | 76184 - 76260 | Not Available |
| hypothetical protein | CJ240_00340 | Not Available | Positive | 76365 - 76694 | 12531.7 |
| sugar abc transporter substrate-binding protein | CJ240_00345 | Not Available | Positive | 77186 - 78343 | 40353.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
