Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_00250 | Not Available | Negative | 55414 - 56604 | 44178.3 |
| hypothetical protein | CJ240_00255 | Not Available | Positive | 57019 - 57462 | 16725.1 |
| carbon storage regulator | CJ240_00260 | Not Available | Positive | 57487 - 57705 | 7956.67 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit alpha | CJ240_00265 | Not Available | Positive | 57860 - 59416 | 54525.1 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | CJ240_00270 | Not Available | Positive | 59420 - 60961 | 53398.0 |
| duf2993 domain-containing protein | CJ240_00275 | Not Available | Negative | 61105 - 61821 | 25653.4 |
| thioredoxin | CJ240_00280 | Not Available | Negative | 61914 - 62243 | 12051.6 |
| thioredoxin-disulfide reductase | CJ240_00285 | Not Available | Negative | 62282 - 63202 | 32620.6 |
| hypothetical protein | CJ240_00290 | Not Available | Negative | 63317 - 67276 | 143036.0 |
| hypothetical protein | CJ240_00295 | Not Available | Negative | 67293 - 69452 | 76270.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
