Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | CJ240_00205 | Not Available | Positive | 43434 - 44846 | 52752.9 |
| penicillin-binding protein | CJ240_00210 | Not Available | Positive | 45304 - 47736 | 87979.2 |
| 30s ribosomal protein s6 | CJ240_00215 | Not Available | Positive | 47961 - 48245 | 10739.1 |
| single-stranded dna-binding protein | CJ240_00220 | Not Available | Positive | 48266 - 48841 | 20179.2 |
| 30s ribosomal protein s18 | CJ240_00225 | Not Available | Positive | 48886 - 49128 | 9153.47 |
| 50s ribosomal protein l9 | CJ240_00230 | Not Available | Positive | 49144 - 49605 | 16897.5 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 49473 - 49568 | Not Available |
| mate family efflux transporter | CJ240_00235 | Not Available | Negative | 49743 - 51056 | 45655.5 |
| replicative dna helicase | CJ240_00240 | Not Available | Positive | 51291 - 52616 | 48749.1 |
| hypothetical protein | CJ240_00245 | Not Available | Negative | 52654 - 55215 | 94474.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
