Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase | CJ240_05010 | Not Available | Negative | 1139422 - 1139871 | 16281.3 |
| hypothetical protein | CJ240_05015 | Not Available | Negative | 1139899 - 1140624 | 26352.3 |
| hypothetical protein | CJ240_05020 | Not Available | Negative | 1140615 - 1141436 | 29398.1 |
| hlyc/corc family transporter | CJ240_05025 | Not Available | Negative | 1141531 - 1142571 | 37285.2 |
| hlyc/corc family transporter | CJ240_05030 | Not Available | Negative | 1142564 - 1143922 | 48501.2 |
| multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit | CJ240_05035 | Not Available | Positive | 1144157 - 1147885 | 138134.0 |
| hypothetical protein | CJ240_05040 | Not Available | Negative | 1148170 - 1148457 | 10840.8 |
| rna polymerase subunit sigma | CJ240_05045 | Not Available | Negative | 1148457 - 1149155 | 26104.8 |
| hypothetical protein | CJ240_05050 | Not Available | Positive | 1149250 - 1149636 | 13594.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | CJ240_05055 | Not Available | Positive | 1149640 - 1150968 | 46963.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
