Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_04910 | Not Available | Negative | 1122235 - 1123311 | 39146.0 |
| gntr family transcriptional regulator | CJ240_04915 | Not Available | Positive | 1123917 - 1124291 | 13666.3 |
| abc transporter atp-binding protein | CJ240_04920 | Not Available | Positive | 1124294 - 1125148 | 31446.1 |
| abc-2 transporter permease | CJ240_04925 | Not Available | Positive | 1125145 - 1125774 | 22493.5 |
| hypothetical protein | CJ240_04930 | Not Available | Positive | 1126226 - 1126606 | 14001.6 |
| hypothetical protein | CJ240_04935 | Not Available | Positive | 1126761 - 1127027 | 10024.1 |
| hypothetical protein | CJ240_04940 | Not Available | Positive | 1127014 - 1127472 | 16766.6 |
| atp-binding protein | CJ240_04945 | Not Available | Positive | 1127469 - 1128272 | 28956.8 |
| hypothetical protein | CJ240_04950 | Not Available | Negative | 1128269 - 1128607 | 12565.1 |
| hypothetical protein | CJ240_04955 | Not Available | Positive | 1128946 - 1129152 | 7413.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
