Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | CJ240_04860 | Not Available | Negative | 1108303 - 1109754 | 52576.1 |
| phosphoribosylamine--glycine ligase | CJ240_04865 | Not Available | Negative | 1109764 - 1110957 | 42652.3 |
| phosphoribosylformylglycinamidine cyclo-ligase | CJ240_04870 | Not Available | Negative | 1110997 - 1111983 | 35091.4 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | CJ240_04875 | Not Available | Negative | 1112062 - 1112772 | 26810.2 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | CJ240_04880 | Not Available | Negative | 1112803 - 1113273 | 16248.8 |
| phosphoribosylformylglycinamidine synthase | CJ240_04885 | Not Available | Negative | 1113264 - 1116710 | 126604.0 |
| thiamine-binding protein | CJ240_04890 | Not Available | Positive | 1117102 - 1117410 | 10909.1 |
| cupin domain-containing protein | CJ240_04895 | Not Available | Negative | 1117578 - 1118033 | 16764.4 |
| hypothetical protein | CJ240_04900 | Not Available | Positive | 1118675 - 1119832 | 41609.4 |
| hypothetical protein | CJ240_04905 | Not Available | Negative | 1120174 - 1121340 | 41376.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
