Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | CJ240_00155 | Not Available | Positive | 35196 - 36467 | 46958.1 |
| d-alanine--d-alanine ligase | CJ240_00160 | Not Available | Positive | 36460 - 37422 | 35200.3 |
| chromosome partitioning protein parb | CJ240_00165 | Not Available | Negative | 37460 - 38608 | 41929.2 |
| para family protein | CJ240_00170 | Not Available | Negative | 38608 - 39483 | 31684.2 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | CJ240_00175 | Not Available | Negative | 39547 - 40200 | 23867.3 |
| single-stranded dna-binding protein | CJ240_00180 | Not Available | Negative | 40262 - 40786 | 19108.1 |
| hypothetical protein | CJ240_00185 | Not Available | Negative | 40822 - 42198 | 52007.0 |
| membrane protein insertion efficiency factor yidd | CJ240_00190 | Not Available | Negative | 42218 - 42544 | 12172.7 |
| ribonuclease p protein component | CJ240_00195 | Not Available | Negative | 42541 - 42894 | 12695.6 |
| 50s ribosomal protein l34 | CJ240_00200 | Not Available | Negative | 42898 - 43035 | 5393.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
