Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain S1948 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1519702 bp
Thymine Count
1533403 bp
Guanine Count
1163224 bp
Cytosine Count
1179512 bp
Genome Length
5395841 bp
Protein-coding Genes
4600 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tube protein hcp | CWB90_17915 | Not Available | Negative | 4091684 - 4092169 | 18828.1 |
| hypothetical protein | CWB90_17925 | Not Available | Negative | 4092948 - 4093340 | 15072.9 |
| type vi secretion system contractile sheath large subunit | CWB90_17930 | Not Available | Negative | 4093594 - 4095120 | 57669.7 |
| type vi secretion system contractile sheath small subunit | CWB90_17935 | Not Available | Negative | 4095132 - 4095650 | 19540.3 |
| type vi secretion protein | CWB90_17940 | Not Available | Negative | 4095709 - 4097292 | 59433.7 |
| type vi secretion system-associated protein tagf | CWB90_17945 | Not Available | Negative | 4097289 - 4098281 | 37379.7 |
| type vi secretion system membrane subunit tssm | CWB90_17950 | Not Available | Negative | 4098289 - 4101999 | 139918.0 |
| dotu family type iv/vi secretion system protein | CWB90_17955 | Not Available | Negative | 4102004 - 4102726 | 26962.7 |
| type vi secretion system baseplate subunit tssk | CWB90_17960 | Not Available | Negative | 4102743 - 4104083 | 49860.7 |
| type vi secretion system lipoprotein tssj | CWB90_17965 | Not Available | Negative | 4104083 - 4104538 | 17303.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
