Pseudoalteromonas sp. S407

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. S407 is a rod-shaped bacterium characterized by a single replicon. It has been cataloged under the accession number PNDZ00000000.1, which provides a reference for its genomic data. The genus Pseudoalteromonas is known for its diverse ecological roles, often associated with marine environments, particularly in association with marine organisms and surfaces. Members of this genus are typically involved in biogeochemical cycles and can produce a variety of bioactive compounds. These compounds may include antimicrobial agents, which have garnered interest for potential applications in pharmaceuticals and biotechnology. The morphology of Pseudoalteromonas sp. S407, being rod-shaped, may facilitate its motility and ability to colonize various surfaces in its aquatic habitat. The presence of a single replicon suggests a streamlined genomic organization, which may contribute to its adaptability and efficiency in resource utilization within its ecological niche. In summary, Pseudoalteromonas sp. S407 represents a specific example of the ecological diversity found within the Pseudoalteromonas genus, emphasizing the significance of rod-shaped bacteria in marine ecosystems. Their ability to produce bioactive compounds and their ecological roles highlight the importance of studying such microorganisms for understanding marine biodiversity and potential biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. S407
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. S407

Gene Summary

Adenine Count

1224389 bp

Thymine Count

1222061 bp

Guanine Count

799398 bp

Cytosine Count

815770 bp

Genome Length

4061618 bp

Protein-coding Genes

3612 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside-diphosphate kinaseCWB61_17640Not AvailablePositive3842984 - 384341515554.4
bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmnCWB61_17645Not AvailablePositive3843599 - 384473241974.8
type iv pilus biogenesis/stability protein pilwCWB61_17650Not AvailablePositive3844848 - 384671969212.9
duf4115 domain-containing proteinCWB61_17655Not AvailablePositive3846716 - 384757631876.8
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseCWB61_17660Not AvailablePositive3847582 - 384870040506.8
histidine--trna ligaseCWB61_17665Not AvailablePositive3848958 - 385023847687.0
hypothetical proteinCWB61_17670Not AvailablePositive3850258 - 385087822007.6
outer membrane protein assembly factor bambCWB61_17675Not AvailablePositive3850889 - 385206742565.6
ribosome biogenesis gtpase derCWB61_17680Not AvailablePositive3852142 - 385360854583.4
gtp-binding protein engaCWB61_17685Not AvailableNegative3853669 - 385417218840.8

Displaying genes 3461 – 3470 of 3712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.