Pseudoalteromonas ruthenica strain S2898

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas ruthenica strain S2898 is characterized as a rod-shaped bacterium. This strain is notable for possessing a single replicon, which can be an important aspect of its genetic stability and replication dynamics. The genomic data for this strain is available under the accession number PNCF00000000.1, providing a resource for further research and analysis. The Pseudoalteromonas genus, to which strain S2898 belongs, is generally found in marine environments and is known for its potential biotechnological applications, including the production of bioactive compounds. The rod shape of Pseudoalteromonas ruthenica may contribute to its adaptability in aquatic ecosystems, allowing for efficient movement and nutrient acquisition. Understanding the genetic and morphological traits of Pseudoalteromonas ruthenica can provide insights into its ecological role in marine environments. The presence of a single replicon suggests a streamlined genomic organization, which may enhance its ability to thrive in specific ecological niches. This adaptability could be significant in the context of microbial interactions within marine communities, potentially influencing nutrient cycles and biogeochemical processes. Overall, Pseudoalteromonas ruthenica strain S2898 exemplifies the diverse adaptations of marine microorganisms to their environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas ruthenica
Strainstrain S2898

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas ruthenica strain S2898

Gene Summary

Adenine Count

1138451 bp

Thymine Count

1133146 bp

Guanine Count

1017526 bp

Cytosine Count

1008246 bp

Genome Length

4297369 bp

Protein-coding Genes

4120 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system contractile sheath small subunitCWC06_06505Not AvailablePositive1395064 - 139556419002.7
type vi secretion system contractile sheath large subunitCWC06_06510Not AvailablePositive1395564 - 139705455518.2
type vi secretion system contractile sheath large subunitCWC06_06515Not AvailablePositive1397100 - 139862357504.8
virulence protein, scie typeCWC06_06520Not AvailablePositive1398644 - 139944130218.4
type vi secretion system baseplate subunit tsseCWC06_06525Not AvailablePositive1399453 - 139994418874.6
type vi secretion system baseplate subunit tssfCWC06_06530Not AvailablePositive1399941 - 140176769828.4
type vi secretion system baseplate subunit tssgCWC06_06535Not AvailablePositive1401764 - 140274736595.0
type vi secretion system atpase tsshCWC06_06540Not AvailablePositive1402765 - 140537795928.6
hcp1 family type vi secretion system effectorCWC06_06545Not AvailablePositive1405650 - 140612917483.8
type vi secretion system tip protein vgrgCWC06_06550Not AvailablePositive1406207 - 140803967480.3

Displaying genes 1381 – 1390 of 4243 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.