Pseudoalteromonas ruthenica strain S3136

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas ruthenica strain S3136 is a rod-shaped bacterium, notable for its single replicon structure. This trait suggests a streamlined genomic organization, which can be advantageous for adaptability and growth in various environments. The strain is cataloged under the accession number PNCD00000000.1, indicating its presence in genomic databases for further research and characterization. As a member of the Pseudoalteromonas genus, this strain is likely to exhibit ecological versatility, often found in marine environments. Pseudoalteromonas species are known for their roles in biogeochemical cycles, particularly in nutrient cycling and organic matter degradation in oceanic ecosystems. The rod shape may contribute to its motility and ability to colonize different niches, allowing it to interact with various microorganisms and participate in complex ecological networks. Understanding the characteristics of Pseudoalteromonas ruthenica strain S3136 can provide insights into its ecological roles and potential applications in biotechnology, such as bioremediation or the production of bioactive compounds. The traits of this strain highlight the importance of marine bacteria in maintaining ecosystem health and their potential utility in environmental and industrial microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas ruthenica
Strainstrain S3136

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas ruthenica strain S3136

Gene Summary

Adenine Count

1082439 bp

Thymine Count

1078138 bp

Guanine Count

974358 bp

Cytosine Count

969867 bp

Genome Length

4104802 bp

Protein-coding Genes

3744 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
virulence protein, scie typeCWC08_13755Not AvailablePositive2960048 - 296084530218.4
type vi secretion system baseplate subunit tsseCWC08_13760Not AvailablePositive2960857 - 296134818874.6
type vi secretion system baseplate subunit tssfCWC08_13765Not AvailablePositive2961345 - 296317169842.4
type vi secretion system baseplate subunit tssgCWC08_13770Not AvailablePositive2963168 - 296415136595.0
type vi secretion system atpase tsshCWC08_13775Not AvailablePositive2964169 - 296678195928.6
hcp1 family type vi secretion system effectorCWC08_13780Not AvailablePositive2967054 - 296753317483.8
type vi secretion system tip protein vgrgCWC08_13785Not AvailablePositive2967611 - 296944367480.3
duf2974 domain-containing proteinCWC08_13790Not AvailablePositive2969445 - 297095053653.1
ankyrin repeat domain-containing proteinCWC08_13795Not AvailablePositive2971035 - 297174225698.8
ankyrin repeat domain-containing proteinCWC08_13800Not AvailablePositive2971937 - 297267126323.4

Displaying genes 2731 – 2740 of 3805 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.