Pseudoalteromonas ruthenica strain S3136

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas ruthenica strain S3136 is a rod-shaped bacterium, notable for its single replicon structure. This trait suggests a streamlined genomic organization, which can be advantageous for adaptability and growth in various environments. The strain is cataloged under the accession number PNCD00000000.1, indicating its presence in genomic databases for further research and characterization. As a member of the Pseudoalteromonas genus, this strain is likely to exhibit ecological versatility, often found in marine environments. Pseudoalteromonas species are known for their roles in biogeochemical cycles, particularly in nutrient cycling and organic matter degradation in oceanic ecosystems. The rod shape may contribute to its motility and ability to colonize different niches, allowing it to interact with various microorganisms and participate in complex ecological networks. Understanding the characteristics of Pseudoalteromonas ruthenica strain S3136 can provide insights into its ecological roles and potential applications in biotechnology, such as bioremediation or the production of bioactive compounds. The traits of this strain highlight the importance of marine bacteria in maintaining ecosystem health and their potential utility in environmental and industrial microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas ruthenica
Strainstrain S3136

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas ruthenica strain S3136

Gene Summary

Adenine Count

1082439 bp

Thymine Count

1078138 bp

Guanine Count

974358 bp

Cytosine Count

969867 bp

Genome Length

4104802 bp

Protein-coding Genes

3744 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
u32 family peptidaseCWC08_10600Not AvailableNegative2283763 - 228511850607.3
nucleoside-diphosphate kinaseCWC08_10605Not AvailablePositive2285406 - 228583715652.5
bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmnCWC08_10610Not AvailablePositive2286007 - 228713742031.7
type iv pilus biogenesis/stability protein pilwCWC08_10615Not AvailablePositive2287229 - 228929575335.2
duf4115 domain-containing proteinCWC08_10620Not AvailablePositive2289298 - 229022734269.0
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseCWC08_10625Not AvailablePositive2290233 - 229135140570.8
histidine--trna ligaseCWC08_10630Not AvailablePositive2291465 - 229273947312.4
hypothetical proteinCWC08_10635Not AvailablePositive2292761 - 229339622486.1
outer membrane protein assembly factor bambCWC08_10640Not AvailablePositive2293409 - 229458142374.7
ribosome biogenesis gtpase derCWC08_10645Not AvailablePositive2294673 - 229613353973.7

Displaying genes 2101 – 2110 of 3805 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.