Pseudoalteromonas ruthenica strain S3136

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas ruthenica strain S3136 is a rod-shaped bacterium, notable for its single replicon structure. This trait suggests a streamlined genomic organization, which can be advantageous for adaptability and growth in various environments. The strain is cataloged under the accession number PNCD00000000.1, indicating its presence in genomic databases for further research and characterization. As a member of the Pseudoalteromonas genus, this strain is likely to exhibit ecological versatility, often found in marine environments. Pseudoalteromonas species are known for their roles in biogeochemical cycles, particularly in nutrient cycling and organic matter degradation in oceanic ecosystems. The rod shape may contribute to its motility and ability to colonize different niches, allowing it to interact with various microorganisms and participate in complex ecological networks. Understanding the characteristics of Pseudoalteromonas ruthenica strain S3136 can provide insights into its ecological roles and potential applications in biotechnology, such as bioremediation or the production of bioactive compounds. The traits of this strain highlight the importance of marine bacteria in maintaining ecosystem health and their potential utility in environmental and industrial microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas ruthenica
Strainstrain S3136

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas ruthenica strain S3136

Gene Summary

Adenine Count

1082439 bp

Thymine Count

1078138 bp

Guanine Count

974358 bp

Cytosine Count

969867 bp

Genome Length

4104802 bp

Protein-coding Genes

3744 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-tyrosyl-trna(tyr) deacylaseCWC08_05820Not AvailableNegative1227582 - 122801915676.9
proline iminopeptidaseCWC08_05825Not AvailableNegative1228007 - 122896035666.5
yihy/virulence factor brkb family proteinCWC08_05830Not AvailableNegative1228963 - 122985632863.7
duf2959 domain-containing proteinCWC08_05835Not AvailablePositive1229945 - 123058624276.3
translational gtpase typaCWC08_05840Not AvailableNegative1230885 - 123271167030.0
glutamate--ammonia ligaseCWC08_05845Not AvailablePositive1233154 - 123456051826.1
duf4124 domain-containing proteinCWC08_05850Not AvailablePositive1234759 - 123525918275.7
nitrogen regulation protein nr(ii)CWC08_05855Not AvailablePositive1235355 - 123640740059.0
nitrogen regulation protein nr(i)CWC08_05860Not AvailablePositive1236427 - 123781851815.9
cyclic nucleotide-binding domain-containing proteinCWC08_05865Not AvailablePositive1237841 - 123830217762.9

Displaying genes 1161 – 1170 of 3805 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.