Pseudoalteromonas ruthenica strain S3257

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas ruthenica strain S3257 is a rod-shaped bacterium characterized by a single replicon, which indicates a streamlined genetic organization that may contribute to its adaptability and survival in various environments. This strain is cataloged under the accession number PNCA00000000.1, which provides a reference for researchers seeking to study its genetic makeup or utilize it in biotechnological applications. The rod shape of P. ruthenica is significant as it can influence the organism's motility, surface adherence, and overall ecological interactions. Rod-shaped bacteria are often well-suited for colonization in diverse environments, including marine ecosystems, where members of the Pseudoalteromonas genus are commonly found. These bacteria are known for their production of various bioactive compounds, which can play crucial roles in microbial competition and symbiotic relationships. In ecological terms, P. ruthenica strain S3257 may contribute to nutrient cycling and the degradation of organic materials in its habitat. Its ability to produce biologically active substances could also influence interactions with other microorganisms and marine life, potentially impacting community structure and dynamics. The study of this strain adds to our understanding of the ecological roles played by marine bacteria and their potential applications in biotechnology and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas ruthenica
Strainstrain S3257

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas ruthenica strain S3257

Gene Summary

Adenine Count

1102107 bp

Thymine Count

1097626 bp

Guanine Count

975536 bp

Cytosine Count

994649 bp

Genome Length

4169918 bp

Protein-coding Genes

3953 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna 2-thiouridine(34) synthase mnmaCWC13_14445Not AvailableNegative3146140 - 314724040988.4
nudix hydrolaseCWC13_14450Not AvailableNegative3147324 - 314776716564.8
pseudouridine synthaseCWC13_14455Not AvailableNegative3147760 - 314839523825.8
nadp-dependent isocitrate dehydrogenaseCWC13_14460Not AvailableNegative3148460 - 315068281166.1
cold shock domain protein cspdCWC13_14465Not AvailableNegative3150987 - 31512087981.31
atp-dependent clp protease adapter clpsCWC13_14470Not AvailablePositive3151409 - 315172612152.5
atp-dependent clp protease atp-binding subunit clpaCWC13_14475Not AvailablePositive3151753 - 315402084073.4
translation initiation factor if-1CWC13_14480Not AvailableNegative3154089 - 31543078203.13
arginyltransferaseCWC13_14485Not AvailableNegative3154405 - 315510927515.1
leucyl/phenylalanyl-trna--protein transferaseCWC13_14490Not AvailableNegative3155075 - 315581828127.6

Displaying genes 2871 – 2880 of 4031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.