Clostridium sp. chh4-2

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. chh4-2 is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait can be significant in understanding the organism's genetic stability and replication efficiency. The accession number for Clostridium sp. chh4-2 is PKUU00000000.1, which serves as a reference for genomic data and facilitates further research and comparison with other Clostridium species. The presence of only one replicon may suggest a specific evolutionary adaptation that allows Clostridium sp. chh4-2 to thrive in its ecological niche. This streamlined genome can be advantageous for survival in environments where resource allocation is critical, possibly leading to a more efficient metabolic pathway. Clostridium species are generally known for their anaerobic capabilities and involvement in various ecological processes, including fermentation and nutrient cycling. The unique genomic structure of Clostridium sp. chh4-2 may play a role in its ecological interactions and functional contributions within microbial communities. Understanding its genetic makeup and adaptations could provide insights into its ecological role, particularly in anaerobic environments where Clostridium species often dominate. In summary, Clostridium sp. chh4-2 is defined by its single replicon and is situated within a diverse group of microorganisms, potentially contributing to important ecological functions within its habitat.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. chh4-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. chh4-2 Scaffold61, whole genome shotgun sequence.

Gene Summary

Adenine Count

1672159 bp

Thymine Count

1638274 bp

Guanine Count

1431055 bp

Cytosine Count

1348249 bp

Genome Length

6089737 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

112 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spore maturation proteinC0033_25915Not AvailablePositive5927066 - 592759618804.9
marr family transcriptional regulatorC0033_25920Not AvailablePositive5927786 - 592824417479.0
hypothetical proteinC0033_25925Not AvailablePositive5928266 - 592886821199.7
duf885 domain-containing proteinC0033_25930Not AvailableNegative5929028 - 593086970670.1
methionine--trna ligaseC0033_25935Not AvailablePositive5931453 - 593343274199.0
hypothetical proteinC0033_25940Not AvailablePositive5933600 - 593435228493.3
hydrolase tatdC0033_25945Not AvailablePositive5934431 - 593519828925.6
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferaseC0033_25950Not AvailablePositive5935258 - 593612732315.2
dihydroxyacetone kinase transcriptional activator dhasC0033_25955Not AvailablePositive5936159 - 593674623131.7
hypothetical proteinC0033_25960Not AvailableNegative5936722 - 59369739652.64

Displaying genes 5121 – 5130 of 5268 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.