Clostridium sp. chh4-2

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. chh4-2 is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait can be significant in understanding the organism's genetic stability and replication efficiency. The accession number for Clostridium sp. chh4-2 is PKUU00000000.1, which serves as a reference for genomic data and facilitates further research and comparison with other Clostridium species. The presence of only one replicon may suggest a specific evolutionary adaptation that allows Clostridium sp. chh4-2 to thrive in its ecological niche. This streamlined genome can be advantageous for survival in environments where resource allocation is critical, possibly leading to a more efficient metabolic pathway. Clostridium species are generally known for their anaerobic capabilities and involvement in various ecological processes, including fermentation and nutrient cycling. The unique genomic structure of Clostridium sp. chh4-2 may play a role in its ecological interactions and functional contributions within microbial communities. Understanding its genetic makeup and adaptations could provide insights into its ecological role, particularly in anaerobic environments where Clostridium species often dominate. In summary, Clostridium sp. chh4-2 is defined by its single replicon and is situated within a diverse group of microorganisms, potentially contributing to important ecological functions within its habitat.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. chh4-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. chh4-2 Scaffold61, whole genome shotgun sequence.

Gene Summary

Adenine Count

1672159 bp

Thymine Count

1638274 bp

Guanine Count

1431055 bp

Cytosine Count

1348249 bp

Genome Length

6089737 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

112 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium-independent anion transporterC0033_15335Not AvailablePositive3439223 - 344088159469.6
hypothetical proteinC0033_15340Not AvailablePositive3441273 - 344166814599.6
rna methyltransferaseC0033_15345Not AvailablePositive3441755 - 344316452874.1
rlua family pseudouridine synthaseC0033_15350Not AvailableNegative3443712 - 344461134215.8
u-box domain-containing protein 56C0033_15355Not AvailablePositive3444754 - 344502310261.8
dna polymerase ivC0033_15360Not AvailableNegative3445258 - 344650246772.2
d-alanyl-d-alanine carboxypeptidaseC0033_15365Not AvailablePositive3446639 - 344789246432.7
carboxyl transferaseC0033_15370Not AvailablePositive3448033 - 344948751599.0
sodium pump decarboxylase subunit gammaC0033_15375Not AvailablePositive3449505 - 345027227346.0
acetyl-coa carboxylase biotin carboxyl carrier protein subunitC0033_15380Not AvailablePositive3450294 - 345066211868.3

Displaying genes 3021 – 3030 of 5268 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.